| biomart-perl | Top |
Nothing here |
| biomart-perl::bin | Top |
| ConfBuilder | |
| ExecuteConfigureBioMartBuilder |
| biomart-perl::cgi-bin | Top |
Nothing here |
| biomart-perl::conf | Top |
Nothing here |
| biomart-perl::conf::Cached | Top |
Nothing here |
| biomart-perl::conf::Cached::default | Top |
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| biomart-perl::conf::Cached::default::XML | Top |
Nothing here |
| biomart-perl::conf::Cached::default::_portables | Top |
Nothing here |
| biomart-perl::conf::Cached::default::confTrees | Top |
Nothing here |
| biomart-perl::conf::Cached_backup | Top |
Nothing here |
| biomart-perl::conf::Cached_backup::Cached | Top |
Nothing here |
| biomart-perl::conf::Cached_backup::Cached::default | Top |
Nothing here |
| biomart-perl::conf::Cached_backup::Cached::default::XML | Top |
Nothing here |
| biomart-perl::conf::Cached_backup::Cached::default::_portables | Top |
Nothing here |
| biomart-perl::conf::Cached_backup::Cached::default::confTrees | Top |
Nothing here |
| biomart-perl::conf::cachedRegistries | Top |
Nothing here |
| biomart-perl::conf::templates | Top |
Nothing here |
| biomart-perl::conf::templates::cached | Top |
Nothing here |
| biomart-perl::conf::templates::custom | Top |
Nothing here |
| biomart-perl::conf::templates::default | Top |
Nothing here |
| biomart-perl::das | Top |
| biomart |
| biomart-perl::htdocs | Top |
Nothing here |
| biomart-perl::htdocs::biomart | Top |
Nothing here |
| biomart-perl::htdocs::biomart::martontology | Top |
Nothing here |
| biomart-perl::htdocs::biomart::mview | Top |
Nothing here |
| biomart-perl::htdocs::biomart::mview::images | Top |
Nothing here |
| biomart-perl::htdocs::biomart::mview::images::gene_schematic | Top |
Nothing here |
| biomart-perl::htdocs::biomart::mview::js | Top |
Nothing here |
| biomart-perl::htdocs::martview | Top |
Nothing here |
| biomart-perl::htdocs::martview::images | Top |
Nothing here |
| biomart-perl::htdocs::martview::images::gene_schematic | Top |
Nothing here |
| biomart-perl::htdocs::martview::js | Top |
Nothing here |
| biomart-perl::htdocs::tmp | Top |
Nothing here |
| biomart-perl::lib | Top |
Nothing here |
| biomart-perl::lib::BioMart | Top |
| AttributeTable | BioMart::AttributeTable |
| Configurator | BioMart::Configurator |
| DatasetI | BioMart::DatasetI |
| Exception | Exceptions thrown by BioMart library modules |
| FormatterI | BioMart::FormatterI |
| Initializer | BioMart::Initializer |
| Links | BioMart::Links |
| Query | BioMart::Query |
| QueryRunner | BioMart::QueryRunner |
| Registry | BioMart::Registry |
| ResultTable | BioMart::ResultTable |
| Root | |
| RootI | |
| Web | Class for handling incoming BioMart web-requests |
| biomart-perl::lib::BioMart::Configuration | Top |
| Attribute | BioMart::Configuration::Attribute |
| AttributeCollection | BioMart::Configuration::AttributeCollection |
| AttributeGroup | BioMart::Configuration::AttributeGroup |
| AttributeList | BioMart::Configuration::AttributeList |
| AttributeTree | BioMart::Configuration::AttributeTree |
| BaseFilter | BioMart::Configuration::BaseFilter |
| BooleanFilter | BioMart::Configuration::BooleanFilter |
| ConfigurationTree | BioMart::Configuration::ConfigurationTree |
| DBLocation | BioMart::Configuration::DBLocation |
| FilterCollection | BioMart::Configuration::FilterCollection |
| FilterGroup | BioMart::Configuration::FilterGroup |
| FilterList | BioMart::Configuration::FilterList |
| FilterList_List | BioMart::Configuration::FilterList_List |
| FilterTree | BioMart::Configuration::FilterTree |
| Location | BioMart::Configuration::Location |
| MartDBLocation | BioMart::Configuration::MartDBLocation |
| MartURLLocation | BioMart::Configuration::MartURLLocation |
| Option | BioMart::Configuration::Option |
| PushAction | BioMart::Configuration::PushAction |
| RegistryDBPointer | BioMart::Configuration::RegistryDBPointer |
| RegistryURLPointer | BioMart::Configuration::RegistryURLPointer |
| URLLocation | BioMart::Configuration::URLLocation |
| ValueFilter | BioMart::Configuration::ValueFilter |
| VirtualSchema | BioMart::Configuration::VirtualSchema |
| biomart-perl::lib::BioMart::Dataset | Top |
| GenomicAlign | BioMart::Dataset::GenomicAlign |
| GenomicMAlign | BioMart::Dataset::GenomicMALign |
| GenomicSequence | BioMart::Dataset::GenomicSequence |
| GenomicSequenceMod | BioMart::Dataset::GenomicSequenceMod |
| TableSet | BioMart::Dataset::TableSet |
| biomart-perl::lib::BioMart::Dataset::GenomicSequence | Top |
| DNAAdaptor | BioMart::Dataset::GenomicSequence::DNAAdaptor.pm |
| biomart-perl::lib::BioMart::Formatter | Top |
| ADF | BioMart::Formatter::ADF |
| ALL | BioMart::Formatter::ALL |
| ALL_TSV | BioMart::Formatter::ALL_TSV |
| AXT | BioMart::Formatter::AXT |
| AXTPLUS | BioMart::Formatter::AXTPLUS |
| CSV | BioMart::Formatter::CSV |
| CSV_36 | BioMart::Formatter::CSV_36 |
| DIFF | BioMart::Formatter::DIFF |
| DIFF_TSV | BioMart::Formatter::DIFF_TSV |
| FASTA | BioMart::Formatter::FASTA |
| FASTAA | BioMart::Formatter::FASTAA |
| FASTACDNA | BioMart::Formatter::FASTACDNA |
| FASTAH | BioMart::Formatter::FASTAH |
| GFF | BioMart::Formatter::GFF |
| HTML | BioMart::Formatter::HTML |
| HTML_36 | BioMart::Formatter::HTML_36 |
| MAF | BioMart::Formatter::MAF |
| MAF_RESTRICTED | BioMart::Formatter::MAF_RESTRICTED |
| MFA | BioMart::Formatter::MFA |
| MFASTA | BioMart::Formatter::MFASTA |
| SAME | BioMart::Formatter::SAME |
| SAME_TSV | BioMart::Formatter::SAME_TSV |
| TSV | BioMart::Formatter::TSV |
| TSV_36 | BioMart::Formatter::TSV_36 |
| TXT | BioMart::Formatter::TXT |
| XLS | BioMart::Formatter::XLS |
| biomart-perl::lib::BioMart::Web | Top |
| CGIXSLT | |
| PageStub | |
| SiteDefs | BioMart::Web::SiteDefs |
| TemplateBuilder | class for building templates for a collection of BioMart datasets |
| Zlib |
| biomart-perl::logs | Top |
Nothing here |
| biomart-perl::scripts | Top |
Nothing here |
| biomart-perl::t | Top |
Nothing here |
| biomart-perl::t::conf | Top |
Nothing here |
| biomart-perl::t::data | Top |