| AnalysisI | An interface to analysis tool factory |
| ApplicationFactoryI | Interface class for Application Factories |
| BlastHitFactory | Factory for Bio::Search::Hit::BlastHit objects |
| BlastResultFactory | Factory for Bio::Search::Result::BlastResult objects |
| DriverFactory | Base class for factory classes loading drivers |
| EMBOSS | EMBOSS appliaction factory class |
| FTLocationFactory | A FeatureTable Location Parser |
| HitFactoryI | Interface for an object that builds Bio::Search::Hit::HitI objects |
| LocationFactoryI | DESCRIPTION of Interface |
| MapFactoryI | A Factory for getting markers |
| ObjectBuilderI | Interface for an object builder |
| ObjectFactory | Instantiates a new Bio::Root::RootI (or derived class) through a factory |
| ObjectFactoryI | A General object creator factory |
| ResultFactoryI | Interface for an object that builds Bio::Search::Result::ResultI objects |
| SeqAnalysisParserFactory | class capable of creating SeqAnalysisParserI compliant parsers |
| SeqAnalysisParserFactoryI | interface describing objects capable of creating SeqAnalysisParserI compliant parsers |
| SequenceFactoryI | This interface allows for generic building of sequences in factories which create sequences (like SeqIO) |
| SequenceProcessorI | Interface for chained sequence processing algorithms |
| SequenceStreamI | Interface describing the basics of a Sequence Stream. |
| TreeFactoryI | Factory Interface for getting and writing trees from/to a data stream |