Included libraries | Package variables | General documentation | Methods |
WebCvs | Raw content |
_columns | No description | Code |
_objs_from_sth | No description | Code |
_tables | No description | Code |
fetch_by_Entry | No description | Code |
fetch_by_blastdbtracking_id | No description | Code |
fetch_by_entry_id | No description | Code |
fetch_by_flat_file | No description | Code |
_columns | description | prev | next | Top |
my $self = shift; return ( 'lcn.entry_id', 'lcn.flat_file', 'lcn.file_offset', 'lcn.blastdbtracking_id');}
_objs_from_sth | description | prev | next | Top |
my ($self, $sth) = @_; my @out; my ( $entry_id, $flat_file, $file_offset, $blastdbtracking_id ); $sth->bind_columns(\$ entry_id,\$ flat_file,\$ file_offset,\$ blastdbtracking_id ); while($sth->fetch()) { push @out, Bio::EnsEMBL::ExternalData::Mole::Location->new( -entry_id => $entry_id, -adaptor => $self, -flat_file => $flat_file, -file_offset => $file_offset, -blastdbtracking_id => $blastdbtracking_id, ); } return\@ out; } 1;}
_tables | description | prev | next | Top |
my $self = shift; return (['location' , 'lcn']);}
fetch_by_Entry | description | prev | next | Top |
my $self = shift; my $entry = shift; my $location_object = $self->fetch_by_entry_id($entry->dbID); return $location_object;}
fetch_by_blastdbtracking_id | description | prev | next | Top |
my ($self, $blastdbtracking_id) = @_; my $constraint = "lcn.blastdbtracking_id = '$blastdbtracking_id'"; my ($location_obj) = @{ $self->generic_fetch($constraint) }; return $location_obj;}
fetch_by_entry_id | description | prev | next | Top |
my ($self, $entry_id) = @_; my $constraint = "lcn.entry_id = '$entry_id'"; my ($location_obj) = @{ $self->generic_fetch($constraint) }; return $location_obj;}
fetch_by_flat_file | description | prev | next | Top |
my ($self, $flat_file) = @_; my $constraint = "lcn.flat_file = '$flat_file'"; my ($location_obj) = @{ $self->generic_fetch($constraint) }; return $location_obj;}