Raw content of XrefMapper::Methods::ExonerateGappedBest1 package XrefMapper::Methods::ExonerateGappedBest1; use XrefMapper::Methods::ExonerateBasic; use vars '@ISA'; @ISA = qw{XrefMapper::Methods::ExonerateBasic}; sub options { return ('--gappedextension FALSE', '--model', 'affine:local', '--subopt', 'no', '--bestn', '1'); } sub query_identity_threshold { return 90; } sub target_identity_threshold { return 90; } 1;