package EnsEMBL::Web::ImageConfig::Vmap2view;
use strict;
use EnsEMBL::Web::ImageConfig;
use vars qw(@ISA);
@ISA = qw(EnsEMBL::Web::ImageConfig);
sub init {
my ($self) = @_;
$self->{'_label'} = 'above',
$self->{'_band_labels'} = 'on',
$self->{'_image_height'} = 450,
$self->{'_top_margin'} = 40,
$self->{'_band_links'} = 'yes',
$self->{'_userdatatype_ID'} = 109;
$self->{'general'}->{'Vmap2view'} = {
'_artefacts' => [qw(Vsnps Vpercents Vgenes Vsupercontigs Videogram)],
'_options' => [],
'_settings' => {
'opt_zclick' => 1,
'width' => 500, # really height <g>
'bgcolor' => 'background1',
'bgcolour1' => 'background1',
'bgcolour2' => 'background1',
'labels' => 1
},
'Vgenes' => {
'on' => 'off',
'pos' => '100',
'width' => 60,
'col_genes' => 'black',
'col_xref' => 'rust',
'col_pred' => 'black',
'col_known' => 'rust',
'logicname' => 'knownGeneDensity geneDensity'
},
'Vrefseqs' => {
'on' => 'off',
'pos' => '110',
'width' => 60,
'col' => 'blue',
'logicname' => 'refseqs'
},
'Vpercents' => {
'on' => 'off',
'pos' => '200',
'width' => 60,
'col_gc' => 'red',
'col_repeat' => 'black',
'logicname' => 'PercentageRepeat PercentGC'
},
'Vsnps' => {
'on' => 'off',
'pos' => '300',
'width' => 60,
'col' => 'blue',
'logicname' => 'snpDensity'
},
'Videogram' => {
'on' => "on",
'pos' => '1000',
'width' => 24,
'bandlabels' => 'on',
'totalwidth' => 100,
'col' => 'g',
'padding' => 6,
},
'Vsupercontigs' => {
'on' => 'off',
'pos' => '400',
'width' => 20,
'totalwidth' => 100,
'padding' => 6,
'col' => 'blue',
'col_ctgs1' => 'green',
'col_ctgs2' => 'darkgreen',
'lab' => 'black',
'available' => 'features MAPSET_SUPERCTGS',
}
};
}
1;