package EnsEMBL::Web::ImageConfig::tsv_sampletranscript;
use strict;
use base qw(EnsEMBL::Web::ImageConfig);
sub init {
my ($self) = @_;
$self->set_parameters({
'title' => 'Sample Transcript slice',
'show_buttons' => 'no', # show +/- buttons
'button_width' => 8, # width of red "+/-" buttons
'show_labels' => 'yes', # show track names on left-hand side
'label_width' => 100, # width of labels on left-hand side
'margin' => 5, # margin
'spacing' => 2, # spacing
'features' => [],
'opt_halfheight' => 0, # glyphs are half-height [ probably removed when this becomes a track config ]
'opt_empty_tracks' => 0, # include empty tracks..
});
$self->create_menus(
'tsv_transcript' => '',
'other' => 'Other'
);
$self->load_tracks();
$self->add_tracks( 'other',
[ 'coverage_top', '', 'coverage', { 'display' => 'on', 'strand' => 'r', 'type' => 'top', 'caption' => 'Resequence coverage', 'menu' => 'no', } ],
[ 'tsv_variations', '', 'tsv_variations', { 'display' => 'normal', 'strand' => 'r', 'colours' => $self->species_defs->colour('variation'), 'menu' => 'no' } ],
);
}
1;