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Summary

Bio::Biblio::PubmedArticle - Representation of a PUBMED article

Package variables

Included modules

Inherit

Bio::Biblio::MedlineArticle

Synopsis

    $obj = new Bio::Biblio::PubmedArticle
                  (-pubmed_history_list =>
                       [ { 'pub_status' => 'pubmed',
			   'date' => '2001-12-1T10:0:00Z' },
			 { 'pub_status' => 'medline',
			   'date' => '2002-1-5T10:1:00Z' } ],
                   -pubmed_status => 'ppublish');
 --- OR ---

    $obj = new Bio::Biblio::PubmedArticle;
    $obj->pubmed_status ('ppublish');

Description

A storage object for a general PUBMED article.
See its place in the class hierarchy in
http://industry.ebi.ac.uk/openBQS/images/bibobjects_perl.gif The following attributes are specific to this class
(however, you can also set and get all attributes defined in the parent classes):

  pubmed_status
  pubmed_provider_id
  pubmed_history_list       type: array ref of hashes
  pubmed_article_id_list    type: array ref of hashes
  pubmed_url_list           type: array ref of hashes

Methods

Methods description

None available.

Methods code

sub _accessible {

	my ($self, $attr) = @_;
	return 1 if exists $_allowed{$attr};
        foreach my $parent (@ISA) {
	    return 1 if $parent->_accessible ($attr);
	}
    }

    # return an expected type of given $attr

}

sub _attr_type {

	my ($self, $attr) = @_;
	if (exists $_allowed{$attr}) {
	    return $_allowed{$attr};
	} else {
	    foreach my $parent (@ISA) {
		if ($parent->_accessible ($attr)) {
		    return $parent->_attr_type ($attr);
		}
	    }
	}
	return 'unknown';
    }
}

1;
__END__

}

General documentation

    OpenBQS home page: http://industry.ebi.ac.uk/openBQS
    Comments to the Perl client: http://industry.ebi.ac.uk/openBQS/Client_perl.html

User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to
the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org              - General discussion
  http://bioperl.org/MailList.shtml  - About the mailing lists

Report bugs to the Bioperl bug tracking system to help us keep track
of the bugs and their resolution. Bug reports can be submitted via
email or the web:

  bioperl-bugs@bioperl.org
  http://bugzilla.bioperl.org/

Martin Senger (senger@ebi.ac.uk)

Copyright (c) 2002 European Bioinformatics Institute. All Rights Reserved.
This module is free software; you can redistribute it and/or modify
it under the same terms as Perl itself.

This software is provided "as is" without warranty of any kind.