| Augustus | Bio::EnsEMBL::Analysis::Runnable::Finished::Augustus |
| Blast | |
| BlastExonerate | |
| EPCR | EPCR.pm |
| EST | |
| Est2Genome | Bio::EnsEMBL::Analysis::Runnable::Finished::Est2Genome |
| Exonerate | |
| GenewiseHmm | Hmms to genomic sequence |
| HalfwiseHMM | Bio::EnsEMBL::Analysis::Runnable::Finished::HalfwiseHMM |
| MiniEst2Genome | Bio::EnsEMBL::Analysis::Runnable::Finished::MiniEst2Genome |
| RepeatMasker | Bio::EnsEMBL::Analysis::Runnable::Finished::RepeatMasker |