Raw content of Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Signalp
<![CDATA[=pod
=head1 NAME
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Signalp
=head1 SYNOPSIS
my $signalp = Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Signalp->new ( -db => $db,
-input_id => $input_id,
-analysis => $analysis,
);
$signalp->fetch_input; # gets sequence from DB
$signalp->run;
$signalp->write_output; # writes features to to DB
=head1 DESCRIPTION
=cut
package Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Signalp;
use strict;
use vars qw(@ISA);
use Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation;
use Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Signalp;
@ISA = qw(Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation);
sub fetch_input {
my ($self, @args) = @_;
$self->SUPER::fetch_input(@args);
my $run = Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Signalp->new(-query => $self->query,
-analysis => $self->analysis);
$self->runnable($run);
}
1;
]]>