Raw content of Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::DBAdaptor
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# BioPerl module for DBSQL::Obj
#
# Cared for by Ewan Birney <birney@sanger.ac.uk>
#
# Copyright Ewan Birney
#
# You may distribute this module under the same terms as perl itself
# POD documentation - main docs before the code
=head1 NAME
Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::DBAdaptor
=head1 SYNOPSIS
$db = Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::DBAdaptor->new(
-user => 'root',
-dbname => 'pog',
-host => 'caldy',
-driver => 'mysql',
);
=head1 DESCRIPTION
This object represents the handle for a CDSTrack database
=head1 CONTACT
Post questions the the EnsEMBL developer list: <ensembl-dev@ebi.ac.uk>
=cut
package Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::DBAdaptor;
use vars qw(@ISA);
use strict;
use Bio::EnsEMBL::DBSQL::DBAdaptor;
@ISA = qw( Bio::EnsEMBL::DBSQL::DBAdaptor );
warn("\n\nUsing ExternalData::CDSTrack DBAdaptor\n\n");
sub get_available_adaptors {
print "Getting available adaptors\n";
my %pairs = (
"Accession" => "Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::AccessionAdaptor",
"CcdsStatus" => "Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::CcdsStatusAdaptor",
"Ccds" => "Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::CcdsAdaptor",
"GroupVersion" => "Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::GroupVersionAdaptor",
"Group" => "Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::GroupAdaptor",
"Interpretation" => "Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::InterpretationAdaptor",
"Location" => "Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::LocationAdaptor",
"Organization" => "Bio::EnsEMBL::ExternalData::CDSTrack::DBSQL::OrganizationAdaptor",
);
return (\%pairs);
}
1;
]]>