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Summary

Bio::EnsEMBL::ExternalData::Mole::DBSQL::DBAdaptor

Package variables

Included modules

Inherit

Bio::EnsEMBL::DBSQL::DBAdaptor

Synopsis

    $db = Bio::EnsEMBL::ExternalData::Mole::DBSQL::DBAdaptor->new(
        -user   => 'root',
        -dbname => 'pog',
        -host   => 'caldy',
        -driver => 'mysql',
        );

Description

This object represents the handle for a Kill-List database

Methods

Methods description

None available.

Methods code

sub get_available_adaptors {

 
  my %pairs =  (
      "Accession"     => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::AccessionAdaptor",
      "BlackList"     => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::BlackListAdaptor",
      "DBXref"        => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::DBXrefAdaptor",
      "Comment"       => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::CommentAdaptor",
      "Description"   => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::DescriptionAdaptor",
      "Entry"         => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::EntryAdaptor",
      "GeneName"      => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::GeneNameAdaptor",
      "Keyword"       => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::KeywordAdaptor",
      "Location"      => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::LocationAdaptor",
      "Sequence"      => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::SequenceAdaptor",
      "Taxonomy"      => "Bio::EnsEMBL::ExternalData::Mole::DBSQL::TaxonomyAdaptor",
        );
  return (\%pairs);
}
 

1;

}

General documentation

Post questions the the EnsEMBL developer list: <ensembl-dev@ebi.ac.uk>