EnsEMBL::Web::Document::HTML SpeciesList
Package variablesGeneral documentationMethods
Toolbar
WebCvsRaw content
Package variables
No package variables defined.
Included modules
EnsEMBL::Web::RegObj
Synopsis
No synopsis!
Description
No description!
Methods
render
No description
Code
Methods description
None available.
Methods code
renderdescriptionprevnextTop
sub render {
  my $self = shift;

  my $species_defs = $ENSEMBL_WEB_REGISTRY->species_defs;
  my @species = sort $species_defs->valid_species;
  my $healthchecks = $species_defs->databases->{'DATABASE_HEALTHCHECK'};
  my $html;

  if ($healthchecks) {

    $html = qq(
<h2>Healthchecks</h2>
<ul>
  <li><a href="/Healthcheck/Summary">Healthcheck summary</a></li>
</ul>
);
  }

  $html .= qq(<h3>Species</h3>
<table style="width:100%">
  <tr>
  );

  my $columns = 2;
  my $column_width = int((100 / $columns) - 8);
my $total = @species; my $break = int($total / $columns);
$break++ if $total % $columns; ## Reset total to number of cells required for a complete table
$total = $break * $columns; my $row = -1; for (my $i=0; $i < $total; $i++) { my $col = int($i % $columns); if ($col == 0 && $i < $total - 1) { $html .= qq(</tr>\n<tr>); } $row++ if $col == 0; my $j = $row + $break * $col; my $dir = $species[$j]; (my $name = $dir) =~ s/_/ /g; $html .= qq(<td style="width:8%;text-align:right;padding-bottom:1em">); if ($dir) { $html .= qq(<img src="/img/species/thumb_$dir.png" alt="$name">); } else { $html .= '&nbsp;'; } $html .= qq(</td>\n<td style="width:$column_width%;padding:2px;padding-bottom:1em">); if ($dir) { if ($healthchecks) { $html .= qq(<span style="font-weight:bold;font-size:1.1em">$name</span><br /><a href="/$dir/Healthcheck/Details">Healthcheck</a> | <a href="http://staging.ensembl.org/$dir/">View on staging</a>); } else { $html .= qq(<a href="/$dir/" style="font-weight:bold;font-size:1.1em;text-decoration:none">$name</a>); } } else { $html .= '&nbsp;'; } $html .= '</td>'; } $html .= qq( </tr> </table>); return $html; } } 1;
}
General documentation
No general documentation available.