Bio::Graphics::Glyph diamond
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Summary
Bio::Graphics::Glyph::diamond - The "diamond" glyph
Package variables
No package variables defined.
Included modules
Bio::Graphics::Glyph::generic
Inherit
Bio::Graphics::Glyph::generic
Synopsis
  See Bio::Graphics::Panel and Bio::Graphics::Glyph.
Description
This glyph draws a diamond of fixed size, positioned in the center of
the feature. The height and width of the diamond are set by the
"height" option. The following options are standard among all Glyphs. See
Bio::Graphics::Glyph for a full explanation.
  Option      Description                      Default
------ ----------- -------
-fgcolor Foreground color black -outlinecolor Synonym for -fgcolor -bgcolor Background color turquoise -fillcolor Synonym for -bgcolor -linewidth Line width 1 -height Height of glyph 10 -font Glyph font gdSmallFont -connector Connector type 0 (false) -connector_color Connector color black -label Whether to draw a label 0 (false) -description Whether to draw a description 0 (false)
Methods
draw_component
No description
Code
Methods description
None available.
Methods code
draw_componentdescriptionprevnextTop
sub draw_component {
  my $self = shift;
  my $gd = shift;
  my $fg = $self->fgcolor;

  # find the center and vertices
my ($x1,$y1,$x2,$y2) = $self->calculate_boundaries(@_); my $xmid = ($x1+$x2)/2;
my $ymid = ($y1+$y2)/2;
my $h = $self->option('height')/2;
$y1 = $ymid - $h; $y2 = $ymid + $h; # if it's a point-like feature, then draw symmetrically
# around the midpoing
if ($self->option('point') || $x2 - $x1 < $h*2) { $x1 = $xmid - $h; $x2 = $xmid + $h; } elsif ($self->option('fallback_to_rectangle')) { return $self->SUPER::draw_component($gd,@_); } $gd->line($x1,$ymid,$xmid,$y1,$fg); $gd->line($xmid,$y1,$x2,$ymid,$fg); $gd->line($x2,$ymid,$xmid,$y2,$fg); $gd->line($xmid,$y2,$x1,$ymid,$fg); if (my $c = $self->bgcolor) { $gd->fillToBorder($xmid,$ymid,$fg,$c); } } 1; __END__
}
General documentation
BUGSTop
If the feature is wider than a point, then the label and description
are placed where the feature's boundary is, and not where the diamond
is drawn.
SEE ALSOTop
Bio::Graphics::Panel,
Bio::Graphics::Glyph,
Bio::Graphics::Glyph::arrow,
Bio::Graphics::Glyph::cds,
Bio::Graphics::Glyph::crossbox,
Bio::Graphics::Glyph::diamond,
Bio::Graphics::Glyph::dna,
Bio::Graphics::Glyph::dot,
Bio::Graphics::Glyph::ellipse,
Bio::Graphics::Glyph::extending_arrow,
Bio::Graphics::Glyph::generic,
Bio::Graphics::Glyph::graded_segments,
Bio::Graphics::Glyph::heterogeneous_segments,
Bio::Graphics::Glyph::line,
Bio::Graphics::Glyph::pinsertion,
Bio::Graphics::Glyph::primers,
Bio::Graphics::Glyph::rndrect,
Bio::Graphics::Glyph::segments,
Bio::Graphics::Glyph::ruler_arrow,
Bio::Graphics::Glyph::toomany,
Bio::Graphics::Glyph::transcript,
Bio::Graphics::Glyph::transcript2,
Bio::Graphics::Glyph::translation,
Bio::Graphics::Glyph::triangle,
Bio::DB::GFF,
Bio::SeqI,
Bio::SeqFeatureI,
Bio::Das,
GD
AUTHORTop
Lincoln Stein <lstein@cshl.org>
Copyright (c) 2001 Cold Spring Harbor Laboratory
This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself. See DISCLAIMER.txt for
disclaimers of warranty.