Bio::EnsEMBL::Lite DBAdaptor
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Summary
Bio::EnsEMBL::Lite::DBAdaptor
Package variables
No package variables defined.
Inherit
Bio::EnsEMBL::DBSQL::DBAdaptor
Synopsis
  $db = Bio::EnsEMBL::DBSQL::DBAdaptor->new(
    -user   => 'anonymous',
    -dbname => 'homo_sapiens_lite_20_34c',
    -host   => 'ensembldb.ensembl.org',
    -driver => 'mysql'
  );

  $snp_adaptor = $db->get_SNPAdaptor();

  @snps = @{ $snp_adaptor->fetch_all_by_Slice($slice) }
Description
This is a database connection to the denormalised lite database. It
allows for the rapid creation of drawable objects that are too slow
to retreive from normalised data sources. Formerly this included many
Ensembl objects such as genes, transcript, exons, etc. but is now
limited to just SNPs.
Methods
get_available_adaptors
No description
Code
Methods description
None available.
Methods code
get_available_adaptorsdescriptionprevnextTop
sub get_available_adaptors {
  my %pairs = ("SNP", "Bio::EnsEMBL::Lite::SNPAdaptor");
  return (\%pairs);
}



1;
}
General documentation
LICENSETop
  Copyright (c) 1999-2009 The European Bioinformatics Institute and
  Genome Research Limited.  All rights reserved.

  This software is distributed under a modified Apache license.
  For license details, please see

    /info/about/code_licence.html
CONTACTTop
  Please email comments or questions to the public Ensembl
  developers list at <ensembl-dev@ebi.ac.uk>.

  Questions may also be sent to the Ensembl help desk at
  <helpdesk@ensembl.org>.