Bio::EnsEMBL::Mapper IndelPair
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Summary
Bio::EnsEMBL::Mapper::IndelPair
Package variables
No package variables defined.
Inherit
Bio::EnsEMBL::Mapper::Pair
Synopsis
Description
Two regions mapped between different coordinate systems are each
represented by a Bio::EnsEMBL::Mapper::Unit and joined together as a
Bio::EnsEMBL::Mapper::Pair, when one of the regions is an indel.
Methods
new
No description
Code
Methods description
None available.
Methods code
newdescriptionprevnextTop
sub new {
  my ($proto, @args) = @_;

  my $class = ref($proto) || $proto;

  my $self = $class->SUPER::new(@args);    # create the Pair object
  $self->{'indel'} = 1;                    # and add the Indel flag

  return $self;
}

1;
}
General documentation
LICENSETop
  Copyright (c) 1999-2009 The European Bioinformatics Institute and
  Genome Research Limited.  All rights reserved.

  This software is distributed under a modified Apache license.
  For license details, please see

    /info/about/code_licence.html
CONTACTTop
  Please email comments or questions to the public Ensembl
  developers list at <ensembl-dev@ebi.ac.uk>.

  Questions may also be sent to the Ensembl help desk at
  <helpdesk@ensembl.org>.