Inherits from:
No subclasses
Overview
Accessor
- code (EnsEMBL::Web::Document::Panel)
- params (EnsEMBL::Web::Document::Panel)
- status (EnsEMBL::Web::Document::Panel)
Constructor
- new (EnsEMBL::Web::Root)
Method
- _format_error (EnsEMBL::Web::Root)
- de_romanize (EnsEMBL::Web::Root)
- dynamic_use (EnsEMBL::Web::Root)
- dynamic_use_failure (EnsEMBL::Web::Root)
- evaluate_bp (EnsEMBL::Web::Root)
- is_valid_module_name (EnsEMBL::Web::Root)
- make_directory (EnsEMBL::Web::Root)
- neat_sr_name (EnsEMBL::Web::Root)
- not_allowed (EnsEMBL::Web::Root)
- pretty_date (EnsEMBL::Web::Root)
- round_bp (EnsEMBL::Web::Root)
- seq_region_sort (EnsEMBL::Web::Root)
- temp_file_create (EnsEMBL::Web::Root)
- temp_file_name (EnsEMBL::Web::Root)
- templatize (EnsEMBL::Web::Root)
- thousandify (EnsEMBL::Web::Root)
- ticket (EnsEMBL::Web::Root)
- url (EnsEMBL::Web::Root)
Unknown
- _caption_with_helplink (EnsEMBL::Web::Document::Panel)
- _content (EnsEMBL::Web::Document::Panel)
- _end
- _end (EnsEMBL::Web::Document::Panel)
- _error
- _error (EnsEMBL::Web::Document::Panel)
- _is_ajax_request (EnsEMBL::Web::Document::Panel)
- _parse_referer (EnsEMBL::Web::Root)
- _render_content (EnsEMBL::Web::Document::Panel)
- _start
- _start (EnsEMBL::Web::Document::Panel)
- add_columns
- add_component (EnsEMBL::Web::Document::Panel)
- add_component_after (EnsEMBL::Web::Document::Panel)
- add_component_before (EnsEMBL::Web::Document::Panel)
- add_component_first (EnsEMBL::Web::Document::Panel)
- add_component_last (EnsEMBL::Web::Document::Panel)
- add_components (EnsEMBL::Web::Document::Panel)
- add_form
- add_option
- add_option (EnsEMBL::Web::Document::Panel)
- add_row
- add_to_component (EnsEMBL::Web::Document::Panel)
- ajax_is_available (EnsEMBL::Web::Document::Panel)
- buffer (EnsEMBL::Web::Document::Panel)
- caption (EnsEMBL::Web::Document::Panel)
- clear_components (EnsEMBL::Web::Document::Panel)
- clear_option
- clear_option (EnsEMBL::Web::Document::Panel)
- clear_options
- clear_options (EnsEMBL::Web::Document::Panel)
- component (EnsEMBL::Web::Document::Panel)
- components (EnsEMBL::Web::Document::Panel)
- content (EnsEMBL::Web::Document::Panel)
- content_Excel (EnsEMBL::Web::Document::Panel)
- content_Text
- content_Text (EnsEMBL::Web::Document::Panel)
- filters (EnsEMBL::Web::Root)
- get_params (EnsEMBL::Web::Document::Panel)
- help_feedback (EnsEMBL::Web::Root)
- intro
- is_asynchronous (EnsEMBL::Web::Document::Panel)
- is_available (EnsEMBL::Web::Root)
- load_asynchronously (EnsEMBL::Web::Document::Panel)
- new
- new (EnsEMBL::Web::Document::Panel)
- option
- option (EnsEMBL::Web::Document::Panel)
- options
- options (EnsEMBL::Web::Document::Panel)
- parse (EnsEMBL::Web::Document::Panel)
- prefix (EnsEMBL::Web::Document::Panel)
- prepend_to_component (EnsEMBL::Web::Document::Panel)
- print (EnsEMBL::Web::Document::Panel)
- printf (EnsEMBL::Web::Document::Panel)
- raw_component (EnsEMBL::Web::Document::Panel)
- remove_component (EnsEMBL::Web::Document::Panel)
- render (EnsEMBL::Web::Document::Panel)
- render_AjaxMenu (EnsEMBL::Web::Document::Panel)
- render_Excel (EnsEMBL::Web::Document::Panel)
- render_Text (EnsEMBL::Web::Document::Panel)
- render_XML (EnsEMBL::Web::Document::Panel)
- render_image (EnsEMBL::Web::Document::Panel)
- renderer (EnsEMBL::Web::Document::Panel)
- replace_component (EnsEMBL::Web::Document::Panel)
- reset_buffer (EnsEMBL::Web::Document::Panel)
- spreadsheet
- strip_HTML (EnsEMBL::Web::Document::Panel)
- tailnote
- timer_push (EnsEMBL::Web::Document::Panel)
Methods
- _format_error
Format an error message by wrapping text to 120 columns
Inherited from EnsEMBL::Web::Root
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code
Accessor.
Inherited from EnsEMBL::Web::Document::Panel
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de_romanize
Converts a number from roman (IV...) format to number...
Inherited from EnsEMBL::Web::Root
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dynamic_use
Equivalent of USE - but used at runtime
Inherited from EnsEMBL::Web::Root
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dynamic_use_failure
Return error message cached if use previously failed!
Inherited from EnsEMBL::Web::Root
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evaluate_bp
Reverse of round BP - takes a value with a K/M/G at the end and converts to integer value...
Inherited from EnsEMBL::Web::Root
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is_valid_module_name
returns true if valid module name...
Inherited from EnsEMBL::Web::Root
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make_directory
Creates a writeable directory - making sure all parents exist!
Inherited from EnsEMBL::Web::Root
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neat_sr_name
Returns seq-region name formatted neatly...
Inherited from EnsEMBL::Web::Root
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new
Constructor. Constructs the class - as its a base class contains nothing.!
Inherited from EnsEMBL::Web::Root
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not_allowed
Loops through array of filters and returns the first one that fails
Inherited from EnsEMBL::Web::Root
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params
Accessor.
Inherited from EnsEMBL::Web::Document::Panel
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pretty_date
Converts a MySQL datetime field into something human-readable
Inherited from EnsEMBL::Web::Root
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round_bp
Returns #bp formatted neatly as either m/k
Inherited from EnsEMBL::Web::Root
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seq_region_sort
Used to sort chromosomes into a sensible order!
Inherited from EnsEMBL::Web::Root
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status
Accessor.
Inherited from EnsEMBL::Web::Document::Panel
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temp_file_create
Creates a temporary file name and makes sure its parent directory exists
Inherited from EnsEMBL::Web::Root
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temp_file_name
Creates a random filename
Inherited from EnsEMBL::Web::Root
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templatize
Takes a string, and a template pattern and returns the string with "/" from the template inserted...
Inherited from EnsEMBL::Web::Root
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thousandify
Retuns comma separated version of number...
Inherited from EnsEMBL::Web::Root
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ticket
Returns a random ticket string
Inherited from EnsEMBL::Web::Root
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url
Assembles a valid URL, adding the site's base URL and CGI-escaping any parametersreturns a URL string
Inherited from EnsEMBL::Web::Root
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