All Perl modules
AedesAegypti
AedesGenBankParser
AffyArray
AffyArrayAdaptor
AffyFeature
AffyFeatureAdaptor
AffyProbe
AffyProbeAdaptor
AgilentParser
AlignStrainSlice
Analysis
AnalysisAdaptor
AnophelesGambiae
AnophelesGambiae
AnophelesSymbolParser
ApisMellifera
ArchiveStableId
ArchiveStableIdAdaptor
Archiver
Argument
AssemblyExceptionFeature
AssemblyExceptionFeatureAdaptor
AssemblyMapper
AssemblyMapperAdaptor
AssemblyProjector
AssemblySliceAdaptor
Attribute
AttributeAdaptor
BaseAdaptor
BaseAlignFeature
BaseAlignFeatureAdaptor
BaseFeatureAdaptor
BaseMapper
BaseMetaContainer
BaseObject
BaseParser
BaseParser
BasicConverter
BasicMapper
BinValue
BinValueSet
BitString
BlastAdaptor
BlastzAligner
CCDSParser
Cache
Cache
CaenorhabditisBriggsae
CaenorhabditisElegans
CanisFamiliaris
CanisFamiliaris
CeleraParser
CeleraProteinParser
CeleraTranscriptParser
ChainedAssemblyMapper
CigarString
CodelinkParser
Collection
CompressedSequenceAdaptor
ConfParser
ConfigRegistry
ConversionSupport
Converter
CoordSystem
CoordSystemAdaptor
Coordinate
CoordinateMapper
CoordinateParser
CoreInfo
DBASSParser
DBAdaptor
DBAdaptor
DBConnection
DBEntry
DBEntryAdaptor
DBLoader
DanioRerio
DanioRerio
DatabaseParser
Deletion
DensityFeature
DensityFeatureAdaptor
DensityFeatureSet
DensityType
DensityTypeAdaptor
DirectParser
DisplayXrefs
Ditag
DitagAdaptor
DitagFeature
DitagFeatureAdaptor
DnaAlignFeatureAdaptor
DnaDnaAlignFeature
DnaPepAlignFeature
DrosophilaMelanogaster
EasyArgv
EnsemblExonGeneric
EnsemblGeneGeneric
EnsemblGeneric
EnsemblTranscriptGeneric
EntrezGeneParser
Entry
Eprof
EprofStack
Exception
Exon
Exon
ExonAdaptor
ExonScoreBuilder
ExonerateBasic
ExonerateBest1
ExonerateGappedBest1
ExonerateGappedBest1_agam
ExonerateGappedBest_90_perc_id
ExonerateUngappedBest1
ExternalFeatureAdaptor
ExternalFeatureFactoryI
FastaParser
Feature
FeaturePair
FlybaseParser
Flybase_dmel_GFFv3_Parser
FuguRubripes
GOParser
GOTermAdaptor
GallusGallus
Gap
Gene
Gene
Gene
Gene
GeneAdaptor
GeneScoreBuilder
GoXref
HGNCParser
HGNC_CCDSParser
HGNC_ENSGParser
HGNC_ENSTParser
HGNC_curated_transcriptParser
HPAParser
HomoSapiens
HomoSapiens
IPIParser
IdentityXref
IlluminaParser
IlluminaWGParser
IndelCoordinate
IndelPair
IndividualSlice
IndividualSliceFactory
Insertion
InterimExon
InterimTranscript
InternalIdMapper
Interpro
InterproGoParser
InterproParser
Intron
JGI_Parser
JGI_ProteinParser
KaryotypeBand
KaryotypeBandAdaptor
Length
LoadMapper
LocalExonerateGappedBest1
Logger
MGDParser
MGI_CCDS_Parser
MGI_Desc_Parser
MGI_Vega_Parser
MGI_curated_transcriptParser
MIMParser
MapLocation
MappedSlice
MappedSliceContainer
Mapper
MappingList
Marker
MarkerAdaptor
MarkerFeature
MarkerFeatureAdaptor
MarkerSynonym
MergedAdaptor
MetaContainer
MetaCoordContainer
MiscFeature
MiscFeatureAdaptor
MiscSet
MiscSetAdaptor
MusMusculus
MusMusculus
OTTTParser
OligoArray
OligoArrayAdaptor
OligoFeature
OligoFeatureAdaptor
OligoProbe
OligoProbeAdaptor
OntologyDBAdaptor
OntologyTerm
OntologyTermAdaptor
PBSExonerateGappedBest1
Pair
PairAlign
PanTroglodytes
PepDnaAlignFeature
PolyA
PredictionExon
PredictionExonAdaptor
PredictionTranscript
PredictionTranscriptAdaptor
ProcessMappings
ProcessPaired
ProcessPrioritys
Programs
ProjectionSegment
ProteinAlignFeatureAdaptor
ProteinFeature
ProteinFeatureAdaptor
ProxySNPAdaptor
Qtl
QtlAdaptor
QtlFeature
QtlFeatureAdaptor
RGDParser
RangeRegistry
RattusNorvegicus
RefSeqGPFFParser
RefSeqParser
RefSeq_CCDSParser
Registry
RepeatConsensus
RepeatConsensusAdaptor
RepeatFeature
RepeatFeature
RepeatFeatureAdaptor
RepeatMaskedSlice
ResultAnalyser
Root
SGDParser
SNP
SNPAdaptor
SchemaConversion
SchemaConverter
ScoreBuilder
ScoredMappingMatrix
ScriptUtils
SegmentParser
SeqDumper
SeqEdit
SeqFeature
SeqFeatureI
SeqRegionCache
Sequence
SequenceAdaptor
Serialisable
SimpleFeature
SimpleFeatureAdaptor
Slice
Slice
SliceAdaptor
StableIdEvent
StableIdHistoryTree
StableIdMapper
StatLogger
StatMsg
StatementHandle
Storable
StrainSlice
SubmitMapper
SupportingFeatureAdaptor
SyntenyFramework
SyntenyRegion
TestMappings
TestUtils
TinyExon
TinyFeature
TinyGene
TinyTranscript
TinyTranslation
TopLevelAssemblyMapper
Transcript
Transcript
Transcript
Transcript
TranscriptAdaptor
TranscriptAlleles
TranscriptFactory
TranscriptMapper
TranscriptSNPs
TranscriptScoreBuilder
TranscriptSupportingFeatureAdaptor
Translation
Translation
TranslationAdaptor
UCSCParser
UnconventionalTranscriptAssociation
UnconventionalTranscriptAssociationAdaptor
UniGeneParser
UniProtParser
UniProtParser_descriptions_only
UniProtVarSplicParser
Unit
UnmappedObject
UnmappedObjectAdaptor
Upstream
User_defined_load
Utils
VBCoordinateMapper
VBasicConverter
VbDirectParser
VbGFF3Parser
VegaParser
Vega_TranParser
WilsonAffyParser
WormPepParser
WormbaseDatabaseStableIDParser
XenopusJamboreeParser
XrefLoader
ZFINParser
aedes_aegypti
anopheles_gambiae
bio_ens
bio_ens_analysis
bio_ens_exon
bio_ens_featurePair
bio_ens_gene
bio_ens_hit
bio_ens_hsp
bio_ens_predictionExon
bio_ens_predictionGene
bio_ens_seqFeature
bio_ens_transcript
caenorhabditis_elegans
canis_familiaris
ciona_intestinalis
cisred
danio_rerio
db
demo
drosophila_ananassae
drosophila_erecta
drosophila_grimshawi
drosophila_melanogaster
drosophila_mojavensis
drosophila_persimilis
drosophila_pseudoobscura
drosophila_sechellia
drosophila_simulans
drosophila_virilis
drosophila_willistoni
drosophila_yakuba
enhancer
ens_bio
ens_bio_featurePair
ens_bio_seqFeature
fugu_rubripes
homo_sapiens
macaca_mulatta
miranda
monodelphis_domestica
mus_musculus
ncRNAParser
ncRNA_DBParser
ornithorhynchus_anatinus
rattus_norvegicus
tetraodon_nigroviridis
xenopus_tropicalis